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Caryoscope

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Caryoscope is a reusable Java UI component -- and a set of parsing utilities; command line tools and an application GUI -- for viewing gene expression data in a whole-genome context.

  • 2006-Jun-16 Caryoscope 0.4.0 is available. We have added tabs to the application and additional functionality to enable users to customize scaling and other settings.
  • 2004-Nov-17 Caryoscope 0.3.10 adds a Y axis ruler to the display.
  • 2004-Jul-26 Caryoscope 0.3.9 is available. We have added several settings affording users much finer control over the colors and general appearance of the display.
  • 2004-Jul-20 Caryoscope 0.3.8 is available, with an updated command line interface and help documentation describing how to run Caryoscope from the command line.
  • 2004-Jul-13 Caryoscope 0.3.7 is available. This eliminates the Numerical data regex setting, which most of our users found to be unnecessary.

Caryoscope is an Open Source project, and is released under the terms of the MIT License. This work is supported by a grant from the National Institutes of Health as part of the Generic Model Organism Database Construction Set. The work is also affiliated with the Stanford Microarray Database and the Department of Genetics at Stanford University.

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Copyright 2003-2004, Ihab A.B. Awad; Copyright 2006, Anjalee Sujanani; Stanford University. All rights reserved.

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